PHARMASTE · POCKET GUIDE
Biostatistics & evidence interpretation
Focused pharmacy study guide for effect measures, diagnostic interpretation, trial appraisal and basic health economics. The module has 40 member-bank questions plus 5 separate free foundation questions. It is not a complete statistics textbook or a claim of whole-exam coverage. All worked study data here are hypothetical.
1. Describe the data and its uncertainty
- Mean and SD summarize the center and spread of suitable continuous data; median and interquartile range are often more informative for markedly skewed data. State the unit and distribution.
- SD describes variation among observations. SE describes uncertainty in an estimate; for an independent sample mean, SE = SD/√n. Increasing n can reduce SE without reducing individual variability.
- For a mean under a suitable normal approximation, 95% CI = mean ± 1.96 × SE. Example: 12.0 ± 1.96 × 1.5 = 9.06 to 14.94. When population variability is estimated in smaller samples, an appropriate t critical value is commonly needed.
- In repeated sampling under the model, a 95% confidence-interval method captures the fixed population parameter about 95% of the time. One observed CI is not the range containing 95% of patient outcomes.
Pause & recall
Does a smaller SE mean that individual patients are less variable?
Sources: CDC Principles of Epidemiology: Statistical Inference · FDA/ICH E9: Statistical Principles for Clinical Trials
2. Keep risk, rate and effect measures distinct
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| Measure | Calculation | Interpretation check |
|---|---|---|
| Risk | Patients with the event ÷ patients initially at risk | State the follow-up period; use comparable follow-up and appropriate handling of censoring. |
| Incidence rate | New events ÷ person-time at risk | 24 events/600 person-years × 100 = 4 per 100 person-years; this is not 4% of patients. |
| RR and RRR | RR = treatment risk/control risk; RRR = 1 − RR | 8% versus 10% gives RR 0.80 and RRR 20%. |
| ARR and NNT | ARR = control risk − treatment risk; NNT = 1/ARR | Use proportions: 0.074 − 0.042 = 0.032; 1/0.032 = 31.25 → 32 patients, rounded up, over the stated 18 months. |
| ARI and NNH | ARI = treatment harm risk − control harm risk; NNH = 1/ARI | 3% versus 1% gives ARI 0.02 and NNH 50 for the specified period. |
| OR | (Exposed cases × unexposed controls)/(unexposed cases × exposed controls) | An odds ratio is not generally a risk ratio; the distinction matters when outcomes are common. |
| HR | Ratio of instantaneous event hazards under the stated model | HR is not a cumulative risk ratio or a direct percentage-point reduction. Check the model assumptions. |
- ARR and benefit NNT here assume treatment reduces an adverse outcome. If the absolute difference is zero, there is no finite NNT. If treatment increases the adverse outcome, interpret the increase as harm rather than reporting a negative benefit NNT.
Pause & recall
Can a 50% relative reduction have an ARR of only 1 percentage point?
Sources: CDC Principles of Epidemiology: Measures of Association · CDC Principles of Epidemiology: Morbidity Frequency Measures · Cochrane Handbook chapter 15: Interpreting results and drawing conclusions · Cochrane Handbook chapter 6: Choosing effect measures and computing estimates
3. Build the diagnostic two-by-two table
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| Measure | Numerator / denominator | Meaning |
|---|---|---|
| Sensitivity | True positives/(true positives + false negatives) | Among those with disease, the fraction testing positive. |
| Specificity | True negatives/(true negatives + false positives) | Among those without disease, the fraction testing negative. |
| PPV | True positives/(true positives + false positives) | Among positive tests, the fraction with disease. |
| NPV | True negatives/(true negatives + false negatives) | Among negative tests, the fraction without disease. |
| LR+ and LR− | Sensitivity/(1 − specificity); (1 − sensitivity)/specificity | Use proportions, not percentages. Post-test odds = pretest odds × LR. |
| Worked PPV | Prevalence 1% in 10,000; sensitivity 90%; specificity 95%: TP 90, FP 495 | PPV = 90/585 = 15.4%. Predictive values depend on prevalence and applicability of the test estimates. |
Pause & recall
Which denominator answers: “Among positive tests, who has disease?”
Sources: FDA: Statistical Guidance on Reporting Results from Studies Evaluating Diagnostic Tests
4. Interpret tests without overstating certainty
- A p value describes the extremeness of data under a specified null model. It is not the probability the null is true, the chance a patient benefits, or an effect-size measure.
- Type I error rejects a true null; alpha is its planned probability. Type II error fails to reject a false null; beta describes it for a specified alternative. Power = 1 − beta. Sample size, variability, effect size and design affect power.
- For conventional two-sided tests, a ratio CI is compared with 1; a difference CI with 0. An interval crossing the null does not prove no effect. Evaluate its precision and whether it allows clinically important benefit or harm.
- Noninferiority requires a defensible prespecified margin and suitable trial conduct. For failure risk (new minus control), a CI of −1 to +3 percentage points lies below a +5-point harm margin: noninferiority, but not superiority. This does not prove equality.
- Multiple outcomes and repeated analyses require a prespecified error-control strategy for confirmatory claims. A significant result in one subgroup and a nonsignificant result in another do not establish an interaction.
Pause & recall
Why does p > 0.05 fail to prove equivalence?
Sources: CDC Field Epidemiology Manual: Analyzing and Interpreting Data · FDA/ICH E9: Statistical Principles for Clinical Trials · FDA: Non-Inferiority Clinical Trials to Establish Effectiveness · FDA: Multiple Endpoints in Clinical Trials
5. Ask how the comparison was created
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| Design feature | What it helps address | Remaining check |
|---|---|---|
| Randomization | Balances measured and unmeasured prognostic factors on average | It does not guarantee exact balance in a particular trial. |
| Allocation concealment | Prevents predicting the next assignment during enrollment | Blinding after assignment is a separate protection. |
| Blinding | Limits behavior and outcome-assessment changes from knowing treatment | Check who was blinded and whether blinding was maintained. |
| ITT analysis | Retains the randomized-group comparison | Describe the estimand, treatment discontinuation, missing outcomes and sensitivity analyses. |
| Cohort or case-control comparison | Allows study of exposures in routine care | Evaluate confounding, selection and measurement bias; case-control sampling does not directly provide disease risks. |
| Confounding by indication | Treatment selection is related to baseline prognosis | Adjustment may leave residual confounding; an association alone does not establish causation. |
Pause & recall
Why can rescue therapy appear harmful in an observational study?
Sources: FDA/ICH E9: Statistical Principles for Clinical Trials · FDA/ICH E9(R1): Estimands and Sensitivity Analysis · CDC Field Epidemiology Manual: Analyzing and Interpreting Data
6. Match the analysis to the question
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| Question | Common method | Assumptions or caution |
|---|---|---|
| Compare continuous means in two independent groups | Independent two-sample t test | Check independence and distribution/variance assumptions; Welch’s approach does not require equal variances. |
| Compare a continuous measure within paired observations | Paired t test | Analyze within-pair differences; assess their distribution. |
| Compare means across more than two independent groups | ANOVA | Check assumptions; a significant overall test does not identify which groups differ. |
| Compare categorical counts | Chi-square test; Fisher exact test when appropriate for sparse two-by-two data | Use independent observations and adequate expected counts for the chi-square approximation. |
| Interpret association | Correlation or regression as appropriate | Correlation does not establish causation; model choice and assumptions still matter. |
Pause & recall
What additional information is needed before choosing paired versus independent analysis?
Sources: NIST/SEMATECH: Two-sample t test for equal means · NIST/SEMATECH: ANOVA table and tests of means · CDC Field Epidemiology Manual: Analyzing and Interpreting Data
7. Translate the result into a clinical decision
- Define the population, intervention, comparator, outcome and time frame. Assess whether the trial population and setting resemble the patient or service in question.
- Report absolute effects alongside relative effects and uncertainty. NNT depends on baseline risk, outcome definition and duration; it is not a universal property of a drug.
- Inspect individual components of composite endpoints. A common laboratory or hospitalization component may drive a result without proving a separate mortality benefit.
- Look for prespecified analyses, complete outcome reporting, losses to follow-up, important harms and practical treatment burden. Statistical significance alone does not establish a worthwhile net benefit.
- For diagnostic studies, examine patient spectrum and the reference standard. Performance in obvious disease and healthy controls may not transfer to patients with uncertain symptoms.
Pause & recall
Does a significant composite outcome establish a mortality benefit?
Sources: FDA: Multiple Endpoints in Clinical Trials · FDA: Statistical Guidance on Reporting Results from Studies Evaluating Diagnostic Tests · Cochrane Handbook chapter 15: Interpreting results and drawing conclusions
8. Read the units in health economics
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| Concept | Worked example | Interpretation |
|---|---|---|
| QALY | 2 years × utility 0.6 + 3 years × utility 0.8 = 3.6 QALYs, ignoring discounting | Combines duration and health-state utility; assumptions and patient perspectives matter. |
| ICER | ($25,000 − $15,000)/(4.5 − 4.0 QALYs) = $20,000 per additional QALY | Use incremental costs and outcomes, not average cost per QALY for one option. |
| Dominance | An option that costs more and produces less health benefit is dominated | Interpret the direction before treating a negative ICER as favorable. |
| Decision context | Check comparator, perspective, time horizon, uncertainty and budget impact | This guide does not apply a universal U.S. cost-effectiveness threshold. |
Pause & recall
Does an ICER below a single dollar figure prove that a treatment is appropriate for every patient?
Sources: CDC: Economic Evaluation — Part V, Cost-Effectiveness Analysis
Abbreviations
- ARR
- absolute risk reduction
- ARI
- absolute risk increase
- RR
- risk ratio
- RRR
- relative risk reduction
- OR
- odds ratio
- HR
- hazard ratio
- NNT
- number needed to treat
- NNH
- number needed to harm
- CI
- confidence interval
- SD
- standard deviation
- SE
- standard error
- PPV
- positive predictive value
- NPV
- negative predictive value
- LR
- likelihood ratio
- ITT
- intention to treat
- ANOVA
- analysis of variance
- QALY
- quality-adjusted life-year
- ICER
- incremental cost-effectiveness ratio
Sources & verification
Guide reviewed . Source checks are dated below. These selected teaching points use the guidance and product references below. Confirm current labeling, the patient's circumstances, and local protocols before applying a regimen.
- CDC Principles of Epidemiology: Statistical Inference — Standard error and worked 95% confidence interval using 1.96 × SE · Checked https://archive.cdc.gov/www_cdc_gov/csels/dsepd/ss1978/lesson2/section7.html
- FDA/ICH E9: Statistical Principles for Clinical Trials — 2.3 methods to minimize bias; 3.3 trial comparisons; 5.2 analysis sets; 5.3 missing values; 5.5 treatment effect estimation · Checked https://www.fda.gov/media/71336/download
- CDC Principles of Epidemiology: Measures of Association — Risk ratios, rate ratios and odds ratios · Checked https://archive.cdc.gov/www_cdc_gov/csels/dsepd/ss1978/lesson3/section5.html
- CDC Principles of Epidemiology: Morbidity Frequency Measures — Incidence proportion and incidence rate; person-time denominators · Checked https://archive.cdc.gov/www_cdc_gov/csels/dsepd/ss1978/lesson3/section2.html
- Cochrane Handbook chapter 15: Interpreting results and drawing conclusions — 15.4.2 and 15.4.4.1: absolute effects, NNT, NNH and rounding · Checked https://www.cochrane.org/authors/handbooks-and-manuals/handbook/current/chapter-15
- Cochrane Handbook chapter 6: Choosing effect measures and computing estimates — 6.8.1: time-to-event outcomes and hazard ratios · Checked https://www.cochrane.org/authors/handbooks-and-manuals/handbook/current/chapter-06
- FDA: Statistical Guidance on Reporting Results from Studies Evaluating Diagnostic Tests — 3: sensitivity, specificity, predictive values and reference standards; 7: worked diagnostic table · Checked https://www.fda.gov/media/71147/download
- CDC Field Epidemiology Manual: Analyzing and Interpreting Data — Measures of association, statistical significance, confidence intervals and confounding · Checked https://www.cdc.gov/field-epi-manual/php/chapters/analyze-interpret-data.html
- FDA: Non-Inferiority Clinical Trials to Establish Effectiveness — III.A–C: hypothesis, prespecified noninferiority margin and confidence interval; design and interpretation · Checked https://www.fda.gov/media/78504/download
- FDA: Multiple Endpoints in Clinical Trials — II–V: endpoint grouping and control of false positive conclusions · Checked https://www.fda.gov/media/162416/download
- FDA/ICH E9(R1): Estimands and Sensitivity Analysis — Estimands, intercurrent events, sensitivity analyses and alignment of trial objectives with analysis · Checked https://www.fda.gov/media/148473/download
- NIST/SEMATECH: Two-sample t test for equal means — Independent versus paired observations; comparing two means and assumptions · Checked https://www.itl.nist.gov/div898/handbook/eda/section3/eda353.htm
- NIST/SEMATECH: ANOVA table and tests of means — Overall comparison of means and limits of omnibus inference · Checked https://www.itl.nist.gov/div898/handbook/prc/section4/prc433.htm
- CDC: Economic Evaluation — Part V, Cost-Effectiveness Analysis — Cost–utility analysis, QALY definition, incremental costs and effects · Checked https://www.cdc.gov/cardiovascular-resources/media/pdfs/Economic-Evaluation-Part5.pdf
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